Cluster: HRGMv2_3017_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3017
- CGC Family ID: CGCFAM_03697
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3017_4 | HRGMv2_3017_4_52 | 52803 | 53408 | - | 9.B.105.1.3 |
| NULL(UNKNOWN) | HRGMv2_3017_4 | HRGMv2_3017_4_53 | 53568 | 55286 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_3017_4 | HRGMv2_3017_4_54 | 55301 | 56467 | - | NAGPA |
| CAZyme | HRGMv2_3017_4 | HRGMv2_3017_4_55 | 56477 | 57577 | - | GT2 |
Gene ID: HRGMv2_3017_4_52
Type: TC
Location: 52803 - 53408 (-)
Type: TC
Location: 52803 - 53408 (-)
Gene ID: HRGMv2_3017_4_53
Type:
Location: 53568 - 55286 (-)
Type:
Location: 53568 - 55286 (-)
Gene ID: HRGMv2_3017_4_54
Type: pfam
Location: 55301 - 56467 (-)
Type: pfam
Location: 55301 - 56467 (-)
Gene ID: HRGMv2_3017_4_55
Type: CAZyme
Location: 56477 - 57577 (-)
Type: CAZyme
Location: 56477 - 57577 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900547405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3017_4_55 | vegan > omnivore | 2.41197 | 0.03511 |
| HRGMv2_3017_4_55 | vegetarian > omnivore | 1.87563 | 0.03548 |