Cluster: HRGMv2_3017_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3017
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3017_52 | HRGMv2_3017_52_1 | 355 | 1593 | + | 2.A.86.1.8 |
| NULL(UNKNOWN) | HRGMv2_3017_52 | HRGMv2_3017_52_2 | 2006 | 2941 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3017_52 | HRGMv2_3017_52_3 | 2953 | 4203 | - | GT4 |
| pfam | HRGMv2_3017_52 | HRGMv2_3017_52_4 | 4200 | 5381 | - | Radical_SAM | SPASM |
| CAZyme | HRGMv2_3017_52 | HRGMv2_3017_52_5 | 5384 | 6466 | - | GT4 |
| TC | HRGMv2_3017_52 | HRGMv2_3017_52_6 | 6689 | 8095 | + | 9.B.18.1.3 |
| TC | HRGMv2_3017_52 | HRGMv2_3017_52_7 | 8305 | 9225 | - | 9.A.8.1.9 |
Gene ID: HRGMv2_3017_52_1
Type: TC
Location: 355 - 1593 (+)
Type: TC
Location: 355 - 1593 (+)
Gene ID: HRGMv2_3017_52_2
Type:
Location: 2006 - 2941 (-)
Type:
Location: 2006 - 2941 (-)
Gene ID: HRGMv2_3017_52_3
Type: CAZyme
Location: 2953 - 4203 (-)
Type: CAZyme
Location: 2953 - 4203 (-)
Gene ID: HRGMv2_3017_52_4
Type: pfam
Location: 4200 - 5381 (-)
Type: pfam
Location: 4200 - 5381 (-)
Gene ID: HRGMv2_3017_52_5
Type: CAZyme
Location: 5384 - 6466 (-)
Type: CAZyme
Location: 5384 - 6466 (-)
Gene ID: HRGMv2_3017_52_6
Type: TC
Location: 6689 - 8095 (+)
Type: TC
Location: 6689 - 8095 (+)
Gene ID: HRGMv2_3017_52_7
Type: TC
Location: 8305 - 9225 (-)
Type: TC
Location: 8305 - 9225 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900547405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.