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Cluster: HRGMv2_3017_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3017_19 HRGMv2_3017_19_22 22723 23646 + 3.A.1.34.1
TC HRGMv2_3017_19 HRGMv2_3017_19_23 23646 24440 + 3.A.1.34.1
pfam HRGMv2_3017_19 HRGMv2_3017_19_24 24581 24853 + PhdYeFM_antitox
pfam HRGMv2_3017_19 HRGMv2_3017_19_25 24837 25151 + ParE_toxin
TC HRGMv2_3017_19 HRGMv2_3017_19_26 25322 26773 + 9.B.18.1.2
CAZyme HRGMv2_3017_19 HRGMv2_3017_19_27 26786 27466 + CE4
pfam HRGMv2_3017_19 HRGMv2_3017_19_28 27496 28317 + Glycos_transf_2
TC HRGMv2_3017_19 HRGMv2_3017_19_29 28338 30299 + 9.B.18.2.1
Gene ID: HRGMv2_3017_19_22
Type: TC
Location: 22723 - 23646 (+)
Gene ID: HRGMv2_3017_19_23
Type: TC
Location: 23646 - 24440 (+)
Gene ID: HRGMv2_3017_19_24
Type: pfam
Location: 24581 - 24853 (+)
Gene ID: HRGMv2_3017_19_25
Type: pfam
Location: 24837 - 25151 (+)
Gene ID: HRGMv2_3017_19_26
Type: TC
Location: 25322 - 26773 (+)
Gene ID: HRGMv2_3017_19_27
Type: CAZyme
Location: 26786 - 27466 (+)
Gene ID: HRGMv2_3017_19_28
Type: pfam
Location: 27496 - 28317 (+)
Gene ID: HRGMv2_3017_19_29
Type: TC
Location: 28338 - 30299 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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