Cluster: HRGMv2_3017_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3017
- CGC Family ID: CGCFAM_00088
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3017_10 | HRGMv2_3017_10_51 | 58320 | 58679 | + | 1.E.14.1.17 |
| TC | HRGMv2_3017_10 | HRGMv2_3017_10_52 | 58681 | 59367 | + | 2.A.122.1.5 |
| CAZyme | HRGMv2_3017_10 | HRGMv2_3017_10_53 | 59398 | 60885 | + | GH77 |
| TC | HRGMv2_3017_10 | HRGMv2_3017_10_54 | 61097 | 62458 | + | 3.A.1.1.45 |
| TC | HRGMv2_3017_10 | HRGMv2_3017_10_55 | 62585 | 63484 | + | 3.A.1.1.45 |
| TC | HRGMv2_3017_10 | HRGMv2_3017_10_56 | 63484 | 64347 | + | 3.A.1.1.45 |
Gene ID: HRGMv2_3017_10_51
Type: TC
Location: 58320 - 58679 (+)
Type: TC
Location: 58320 - 58679 (+)
Gene ID: HRGMv2_3017_10_52
Type: TC
Location: 58681 - 59367 (+)
Type: TC
Location: 58681 - 59367 (+)
Gene ID: HRGMv2_3017_10_53
Type: CAZyme
Location: 59398 - 60885 (+)
Type: CAZyme
Location: 59398 - 60885 (+)
Gene ID: HRGMv2_3017_10_54
Type: TC
Location: 61097 - 62458 (+)
Type: TC
Location: 61097 - 62458 (+)
Gene ID: HRGMv2_3017_10_55
Type: TC
Location: 62585 - 63484 (+)
Type: TC
Location: 62585 - 63484 (+)
Gene ID: HRGMv2_3017_10_56
Type: TC
Location: 63484 - 64347 (+)
Type: TC
Location: 63484 - 64347 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900547405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3017_10_54 | vegetarian > vegan | 1.05069 | 0.01057 |