Cluster: HRGMv2_3017_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3017
- CGC Family ID: CGCFAM_07512
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3017_1 | HRGMv2_3017_1_55 | 67733 | 69292 | + | GH13_20 |
| pfam | HRGMv2_3017_1 | HRGMv2_3017_1_56 | 69569 | 70726 | + | DUF4317 |
| TC | HRGMv2_3017_1 | HRGMv2_3017_1_57 | 70929 | 71546 | - | 2.A.115.2.14 |
Gene ID: HRGMv2_3017_1_55
Type: CAZyme
Location: 67733 - 69292 (+)
Type: CAZyme
Location: 67733 - 69292 (+)
Gene ID: HRGMv2_3017_1_56
Type: pfam
Location: 69569 - 70726 (+)
Type: pfam
Location: 69569 - 70726 (+)
Gene ID: HRGMv2_3017_1_57
Type: TC
Location: 70929 - 71546 (-)
Type: TC
Location: 70929 - 71546 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Faecousia
Species
Faecousia sp900547405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_3017_1_57 | vegetarian > omnivore | 1.25948 | 0.03548 |