Cluster: HRGMv2_3016_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_3016
- CGC Family ID: CGCFAM_09798
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3016_7 | HRGMv2_3016_7_32 | 47567 | 48451 | + | 3.A.1.1.41 |
| NULL(UNKNOWN) | HRGMv2_3016_7 | HRGMv2_3016_7_33 | 48448 | 51348 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3016_7 | HRGMv2_3016_7_34 | 51345 | 53288 | + | GH163 |
| pfam | HRGMv2_3016_7 | HRGMv2_3016_7_35 | 53337 | 56441 | + | Big_2 |
| CAZyme | HRGMv2_3016_7 | HRGMv2_3016_7_36 | 56477 | 58006 | + | GH32 |
| CAZyme | HRGMv2_3016_7 | HRGMv2_3016_7_37 | 58021 | 59856 | + | GH20 |
Gene ID: HRGMv2_3016_7_32
Type: TC
Location: 47567 - 48451 (+)
Type: TC
Location: 47567 - 48451 (+)
Gene ID: HRGMv2_3016_7_33
Type:
Location: 48448 - 51348 (+)
Type:
Location: 48448 - 51348 (+)
Gene ID: HRGMv2_3016_7_34
Type: CAZyme
Location: 51345 - 53288 (+)
Type: CAZyme
Location: 51345 - 53288 (+)
Gene ID: HRGMv2_3016_7_35
Type: pfam
Location: 53337 - 56441 (+)
Type: pfam
Location: 53337 - 56441 (+)
Gene ID: HRGMv2_3016_7_36
Type: CAZyme
Location: 56477 - 58006 (+)
Type: CAZyme
Location: 56477 - 58006 (+)
Gene ID: HRGMv2_3016_7_37
Type: CAZyme
Location: 58021 - 59856 (+)
Type: CAZyme
Location: 58021 - 59856 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp934432675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.