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Cluster: HRGMv2_3016_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_3016_7 HRGMv2_3016_7_4 6553 8067 - GH31_19
CAZyme HRGMv2_3016_7 HRGMv2_3016_7_5 8080 10071 - GH3
CAZyme HRGMv2_3016_7 HRGMv2_3016_7_6 10052 11227 - GH37
pfam HRGMv2_3016_7 HRGMv2_3016_7_7 11294 12832 - Big_2 | Big-like
pfam HRGMv2_3016_7 HRGMv2_3016_7_8 12900 14615 - Bmp
TC HRGMv2_3016_7 HRGMv2_3016_7_9 14619 15518 - 3.A.1.1.9
TC HRGMv2_3016_7 HRGMv2_3016_7_10 15536 16489 - 3.A.1.1.9
TC HRGMv2_3016_7 HRGMv2_3016_7_11 16497 18158 - 3.A.1.1.10
TF HRGMv2_3016_7 HRGMv2_3016_7_12 18373 19533 - HTH_AraC
TC HRGMv2_3016_7 HRGMv2_3016_7_13 19514 21253 - 9.B.33.1.1
Gene ID: HRGMv2_3016_7_4
Type: CAZyme
Location: 6553 - 8067 (-)
Gene ID: HRGMv2_3016_7_5
Type: CAZyme
Location: 8080 - 10071 (-)
Gene ID: HRGMv2_3016_7_6
Type: CAZyme
Location: 10052 - 11227 (-)
Gene ID: HRGMv2_3016_7_7
Type: pfam
Location: 11294 - 12832 (-)
Gene ID: HRGMv2_3016_7_8
Type: pfam
Location: 12900 - 14615 (-)
Gene ID: HRGMv2_3016_7_9
Type: TC
Location: 14619 - 15518 (-)
Gene ID: HRGMv2_3016_7_10
Type: TC
Location: 15536 - 16489 (-)
Gene ID: HRGMv2_3016_7_11
Type: TC
Location: 16497 - 18158 (-)
Gene ID: HRGMv2_3016_7_12
Type: TF
Location: 18373 - 19533 (-)
Gene ID: HRGMv2_3016_7_13
Type: TC
Location: 19514 - 21253 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA1740
→
Species
UBA1740 sp934432675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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