Cluster: HRGMv2_3016_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3016
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3016_6 | HRGMv2_3016_6_16 | 19951 | 21009 | - | GH43_24 |
| TC | HRGMv2_3016_6 | HRGMv2_3016_6_17 | 21134 | 22915 | - | 3.A.1.135.5 |
| TC | HRGMv2_3016_6 | HRGMv2_3016_6_18 | 22912 | 24639 | - | 3.A.1.135.5 |
| pfam | HRGMv2_3016_6 | HRGMv2_3016_6_19 | 24636 | 25091 | - | 2-thiour_desulf |
| TC | HRGMv2_3016_6 | HRGMv2_3016_6_20 | 25350 | 26777 | - | 2.A.40.1.2 |
| STP | HRGMv2_3016_6 | HRGMv2_3016_6_21 | 27203 | 27742 | - | Pribosyltran |
| pfam | HRGMv2_3016_6 | HRGMv2_3016_6_22 | 27901 | 28455 | + | YajC |
| TC | HRGMv2_3016_6 | HRGMv2_3016_6_23 | 28621 | 30054 | - | 3.A.1.5.25 |
| TC | HRGMv2_3016_6 | HRGMv2_3016_6_24 | 30051 | 31472 | - | 3.A.1.5.25 |
| TC | HRGMv2_3016_6 | HRGMv2_3016_6_25 | 31480 | 32457 | - | 3.A.1.5.19 |
| TC | HRGMv2_3016_6 | HRGMv2_3016_6_26 | 32463 | 34064 | - | 3.A.1.5.10 |
Gene ID: HRGMv2_3016_6_16
Type: CAZyme
Location: 19951 - 21009 (-)
Type: CAZyme
Location: 19951 - 21009 (-)
Gene ID: HRGMv2_3016_6_17
Type: TC
Location: 21134 - 22915 (-)
Type: TC
Location: 21134 - 22915 (-)
Gene ID: HRGMv2_3016_6_18
Type: TC
Location: 22912 - 24639 (-)
Type: TC
Location: 22912 - 24639 (-)
Gene ID: HRGMv2_3016_6_19
Type: pfam
Location: 24636 - 25091 (-)
Type: pfam
Location: 24636 - 25091 (-)
Gene ID: HRGMv2_3016_6_20
Type: TC
Location: 25350 - 26777 (-)
Type: TC
Location: 25350 - 26777 (-)
Gene ID: HRGMv2_3016_6_21
Type: STP
Location: 27203 - 27742 (-)
Type: STP
Location: 27203 - 27742 (-)
Gene ID: HRGMv2_3016_6_22
Type: pfam
Location: 27901 - 28455 (+)
Type: pfam
Location: 27901 - 28455 (+)
Gene ID: HRGMv2_3016_6_23
Type: TC
Location: 28621 - 30054 (-)
Type: TC
Location: 28621 - 30054 (-)
Gene ID: HRGMv2_3016_6_24
Type: TC
Location: 30051 - 31472 (-)
Type: TC
Location: 30051 - 31472 (-)
Gene ID: HRGMv2_3016_6_25
Type: TC
Location: 31480 - 32457 (-)
Type: TC
Location: 31480 - 32457 (-)
Gene ID: HRGMv2_3016_6_26
Type: TC
Location: 32463 - 34064 (-)
Type: TC
Location: 32463 - 34064 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp934432675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.