Cluster: HRGMv2_3016_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3016
- CGC Family ID: CGCFAM_05150
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3016_4 | HRGMv2_3016_4_81 | 92786 | 93535 | - | 3.A.1.105.1 |
| TF | HRGMv2_3016_4 | HRGMv2_3016_4_82 | 93532 | 93744 | - | SpoVT_AbrB |
| CAZyme | HRGMv2_3016_4 | HRGMv2_3016_4_83 | 93955 | 95388 | + | GH77 |
Gene ID: HRGMv2_3016_4_81
Type: TC
Location: 92786 - 93535 (-)
Type: TC
Location: 92786 - 93535 (-)
Gene ID: HRGMv2_3016_4_82
Type: TF
Location: 93532 - 93744 (-)
Type: TF
Location: 93532 - 93744 (-)
Gene ID: HRGMv2_3016_4_83
Type: CAZyme
Location: 93955 - 95388 (+)
Type: CAZyme
Location: 93955 - 95388 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp934432675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.