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Cluster: HRGMv2_3016_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3016_32 HRGMv2_3016_32_2 1247 2668 + 3.A.1.1.24
NULL(UNKNOWN) HRGMv2_3016_32 HRGMv2_3016_32_3 2668 3996 + NULL(UNKNOWN)
[View Structural Homologs]
STP HRGMv2_3016_32 HRGMv2_3016_32_4 3993 4907 + PfkB
CAZyme HRGMv2_3016_32 HRGMv2_3016_32_5 5006 8656 + CBM66 | GH32
TF HRGMv2_3016_32 HRGMv2_3016_32_6 8692 9669 + LacI
TC HRGMv2_3016_32 HRGMv2_3016_32_7 9786 11120 + 3.A.1.1.20
TC HRGMv2_3016_32 HRGMv2_3016_32_8 11228 12202 + 3.A.1.1.20
TC HRGMv2_3016_32 HRGMv2_3016_32_9 12204 12878 + 3.A.1.1.39
Gene ID: HRGMv2_3016_32_2
Type: TC
Location: 1247 - 2668 (+)
Gene ID: HRGMv2_3016_32_3
Type:
Location: 2668 - 3996 (+)
Gene ID: HRGMv2_3016_32_4
Type: STP
Location: 3993 - 4907 (+)
Gene ID: HRGMv2_3016_32_5
Type: CAZyme
Location: 5006 - 8656 (+)
Gene ID: HRGMv2_3016_32_6
Type: TF
Location: 8692 - 9669 (+)
Gene ID: HRGMv2_3016_32_7
Type: TC
Location: 9786 - 11120 (+)
Gene ID: HRGMv2_3016_32_8
Type: TC
Location: 11228 - 12202 (+)
Gene ID: HRGMv2_3016_32_9
Type: TC
Location: 12204 - 12878 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA1740
→
Species
UBA1740 sp934432675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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