dbCAN Logo

Cluster: HRGMv2_3016_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3016_18 HRGMv2_3016_18_10 9067 10785 - 3.A.1.5.19
TC HRGMv2_3016_18 HRGMv2_3016_18_11 10745 12937 - 3.A.1.5.25
TC HRGMv2_3016_18 HRGMv2_3016_18_12 12940 14526 - 3.A.1.5.2
TC HRGMv2_3016_18 HRGMv2_3016_18_13 14528 15514 - 3.A.1.5.19
STP HRGMv2_3016_18 HRGMv2_3016_18_14 15604 18132 - SBP_bac_5
pfam HRGMv2_3016_18 HRGMv2_3016_18_15 18576 19700 - APH
CAZyme HRGMv2_3016_18 HRGMv2_3016_18_16 19762 20991 - GH109
CAZyme HRGMv2_3016_18 HRGMv2_3016_18_17 21006 22625 - GH123
pfam HRGMv2_3016_18 HRGMv2_3016_18_18 22647 23024 - FeoB_associated
TC HRGMv2_3016_18 HRGMv2_3016_18_19 23021 25033 - 9.A.8.1.6
Gene ID: HRGMv2_3016_18_10
Type: TC
Location: 9067 - 10785 (-)
Gene ID: HRGMv2_3016_18_11
Type: TC
Location: 10745 - 12937 (-)
Gene ID: HRGMv2_3016_18_12
Type: TC
Location: 12940 - 14526 (-)
Gene ID: HRGMv2_3016_18_13
Type: TC
Location: 14528 - 15514 (-)
Gene ID: HRGMv2_3016_18_14
Type: STP
Location: 15604 - 18132 (-)
Gene ID: HRGMv2_3016_18_15
Type: pfam
Location: 18576 - 19700 (-)
Gene ID: HRGMv2_3016_18_16
Type: CAZyme
Location: 19762 - 20991 (-)
Gene ID: HRGMv2_3016_18_17
Type: CAZyme
Location: 21006 - 22625 (-)
Gene ID: HRGMv2_3016_18_18
Type: pfam
Location: 22647 - 23024 (-)
Gene ID: HRGMv2_3016_18_19
Type: TC
Location: 23021 - 25033 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA1740
→
Species
UBA1740 sp934432675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List