Cluster: HRGMv2_3016_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3016
- CGC Family ID: CGCFAM_00674
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3016_14 | HRGMv2_3016_14_25 | 28802 | 29683 | - | 3.A.1.1.34 |
| TC | HRGMv2_3016_14 | HRGMv2_3016_14_26 | 29673 | 30566 | - | 3.A.1.1.11 |
| STP | HRGMv2_3016_14 | HRGMv2_3016_14_27 | 30571 | 32526 | - | SBP_bac_1 | SBP_bac_1 |
| NULL(UNKNOWN) | HRGMv2_3016_14 | HRGMv2_3016_14_28 | 32554 | 34107 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_3016_14 | HRGMv2_3016_14_29 | 34107 | 35810 | - | GH43 |
Gene ID: HRGMv2_3016_14_25
Type: TC
Location: 28802 - 29683 (-)
Type: TC
Location: 28802 - 29683 (-)
Gene ID: HRGMv2_3016_14_26
Type: TC
Location: 29673 - 30566 (-)
Type: TC
Location: 29673 - 30566 (-)
Gene ID: HRGMv2_3016_14_27
Type: STP
Location: 30571 - 32526 (-)
Type: STP
Location: 30571 - 32526 (-)
Gene ID: HRGMv2_3016_14_28
Type:
Location: 32554 - 34107 (-)
Type:
Location: 32554 - 34107 (-)
Gene ID: HRGMv2_3016_14_29
Type: CAZyme
Location: 34107 - 35810 (-)
Type: CAZyme
Location: 34107 - 35810 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp934432675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.