Cluster: HRGMv2_3016_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_3016
- CGC Family ID: CGCFAM_10283
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_3016_11 | HRGMv2_3016_11_6 | 8088 | 11099 | + | GH2 |
| TC | HRGMv2_3016_11 | HRGMv2_3016_11_7 | 11101 | 12981 | + | 3.A.1.1.24 |
| STP | HRGMv2_3016_11 | HRGMv2_3016_11_8 | 13000 | 14871 | + | SBP_bac_1 |
| TC | HRGMv2_3016_11 | HRGMv2_3016_11_9 | 14877 | 15830 | + | 3.A.1.1.21 |
| TC | HRGMv2_3016_11 | HRGMv2_3016_11_10 | 15830 | 16750 | + | 3.A.1.1.34 |
| CAZyme | HRGMv2_3016_11 | HRGMv2_3016_11_11 | 16805 | 18802 | + | GH43 |
Gene ID: HRGMv2_3016_11_6
Type: CAZyme
Location: 8088 - 11099 (+)
Type: CAZyme
Location: 8088 - 11099 (+)
Gene ID: HRGMv2_3016_11_7
Type: TC
Location: 11101 - 12981 (+)
Type: TC
Location: 11101 - 12981 (+)
Gene ID: HRGMv2_3016_11_8
Type: STP
Location: 13000 - 14871 (+)
Type: STP
Location: 13000 - 14871 (+)
Gene ID: HRGMv2_3016_11_9
Type: TC
Location: 14877 - 15830 (+)
Type: TC
Location: 14877 - 15830 (+)
Gene ID: HRGMv2_3016_11_10
Type: TC
Location: 15830 - 16750 (+)
Type: TC
Location: 15830 - 16750 (+)
Gene ID: HRGMv2_3016_11_11
Type: CAZyme
Location: 16805 - 18802 (+)
Type: CAZyme
Location: 16805 - 18802 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-272
Genus
UBA1740
Species
UBA1740 sp934432675
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.