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Cluster: HRGMv2_3016_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3016_10 HRGMv2_3016_10_8 5615 6265 - 1.A.22.1.3
STP HRGMv2_3016_10 HRGMv2_3016_10_9 6500 7309 + SBP_bac_3
TC HRGMv2_3016_10 HRGMv2_3016_10_10 7321 7980 + 3.A.1.3.14
TC HRGMv2_3016_10 HRGMv2_3016_10_11 8007 8813 + 3.A.1.3.10
NULL(UNKNOWN) HRGMv2_3016_10 HRGMv2_3016_10_12 8964 9476 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_3016_10 HRGMv2_3016_10_13 9473 11992 - GH78
peptidase HRGMv2_3016_10 HRGMv2_3016_10_14 12009 13145 - S12.UPW
TF HRGMv2_3016_10 HRGMv2_3016_10_15 13407 14018 - HTH_3
TC HRGMv2_3016_10 HRGMv2_3016_10_16 14463 15137 + 1.C.113.1.3
Gene ID: HRGMv2_3016_10_8
Type: TC
Location: 5615 - 6265 (-)
Gene ID: HRGMv2_3016_10_9
Type: STP
Location: 6500 - 7309 (+)
Gene ID: HRGMv2_3016_10_10
Type: TC
Location: 7321 - 7980 (+)
Gene ID: HRGMv2_3016_10_11
Type: TC
Location: 8007 - 8813 (+)
Gene ID: HRGMv2_3016_10_12
Type:
Location: 8964 - 9476 (-)
Gene ID: HRGMv2_3016_10_13
Type: CAZyme
Location: 9473 - 11992 (-)
Gene ID: HRGMv2_3016_10_14
Type: peptidase
Location: 12009 - 13145 (-)
Gene ID: HRGMv2_3016_10_15
Type: TF
Location: 13407 - 14018 (-)
Gene ID: HRGMv2_3016_10_16
Type: TC
Location: 14463 - 15137 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-272
→
Genus
UBA1740
→
Species
UBA1740 sp934432675

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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