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Cluster: HRGMv2_3015_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_3015_13 HRGMv2_3015_13_15 16190 17551 + 2.A.66.1.33
NULL(UNKNOWN) HRGMv2_3015_13 HRGMv2_3015_13_16 17548 18420 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_3015_13 HRGMv2_3015_13_17 18630 19049 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_3015_13 HRGMv2_3015_13_18 19231 20982 + 3.A.1.135.5
pfam HRGMv2_3015_13 HRGMv2_3015_13_19 21038 22360 + PGA_cap
CAZyme HRGMv2_3015_13 HRGMv2_3015_13_20 22383 23444 + GH179
pfam HRGMv2_3015_13 HRGMv2_3015_13_21 23497 24171 - PAP2 | PAP2_3
pfam HRGMv2_3015_13 HRGMv2_3015_13_22 24303 26189 + Radical_SAM_N | DUF3362
TC HRGMv2_3015_13 HRGMv2_3015_13_23 26267 27058 - 3.A.1.3.15
TC HRGMv2_3015_13 HRGMv2_3015_13_24 27042 27743 - 3.A.1.3.20
Gene ID: HRGMv2_3015_13_15
Type: TC
Location: 16190 - 17551 (+)
Gene ID: HRGMv2_3015_13_16
Type:
Location: 17548 - 18420 (+)
Gene ID: HRGMv2_3015_13_17
Type:
Location: 18630 - 19049 (-)
Gene ID: HRGMv2_3015_13_18
Type: TC
Location: 19231 - 20982 (+)
Gene ID: HRGMv2_3015_13_19
Type: pfam
Location: 21038 - 22360 (+)
Gene ID: HRGMv2_3015_13_20
Type: CAZyme
Location: 22383 - 23444 (+)
Gene ID: HRGMv2_3015_13_21
Type: pfam
Location: 23497 - 24171 (-)
Gene ID: HRGMv2_3015_13_22
Type: pfam
Location: 24303 - 26189 (+)
Gene ID: HRGMv2_3015_13_23
Type: TC
Location: 26267 - 27058 (-)
Gene ID: HRGMv2_3015_13_24
Type: TC
Location: 27042 - 27743 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
CAG-382
→
Genus
UBA1752
→
Species
UBA1752 sp900554405

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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