Cluster: HRGMv2_3015_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3015
- CGC Family ID: CGCFAM_00590
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3015_11 | HRGMv2_3015_11_42 | 40618 | 42477 | + | 3.A.3.6.10 |
| pfam | HRGMv2_3015_11 | HRGMv2_3015_11_43 | 42585 | 43673 | - | Tubulin | FtsZ_C |
| pfam | HRGMv2_3015_11 | HRGMv2_3015_11_44 | 43811 | 44602 | - | POTRA_1 |
| CAZyme | HRGMv2_3015_11 | HRGMv2_3015_11_45 | 44640 | 45746 | - | GT28 |
| TC | HRGMv2_3015_11 | HRGMv2_3015_11_46 | 45769 | 46998 | - | 2.A.103.1.3 |
| TC | HRGMv2_3015_11 | HRGMv2_3015_11_47 | 47018 | 48025 | - | 9.B.146.1.3 |
Gene ID: HRGMv2_3015_11_42
Type: TC
Location: 40618 - 42477 (+)
Type: TC
Location: 40618 - 42477 (+)
Gene ID: HRGMv2_3015_11_43
Type: pfam
Location: 42585 - 43673 (-)
Type: pfam
Location: 42585 - 43673 (-)
Gene ID: HRGMv2_3015_11_44
Type: pfam
Location: 43811 - 44602 (-)
Type: pfam
Location: 43811 - 44602 (-)
Gene ID: HRGMv2_3015_11_45
Type: CAZyme
Location: 44640 - 45746 (-)
Type: CAZyme
Location: 44640 - 45746 (-)
Gene ID: HRGMv2_3015_11_46
Type: TC
Location: 45769 - 46998 (-)
Type: TC
Location: 45769 - 46998 (-)
Gene ID: HRGMv2_3015_11_47
Type: TC
Location: 47018 - 48025 (-)
Type: TC
Location: 47018 - 48025 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
CAG-382
Genus
UBA1752
Species
UBA1752 sp900554405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.