Cluster: HRGMv2_3004_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_3004
- CGC Family ID: CGCFAM_01412
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_3004_15 | HRGMv2_3004_15_16 | 15579 | 16094 | + | 2.A.87.3.2 |
| TC | HRGMv2_3004_15 | HRGMv2_3004_15_17 | 16099 | 17166 | + | 3.A.24.1.1 |
| pfam | HRGMv2_3004_15 | HRGMv2_3004_15_18 | 17163 | 18152 | + | 2-Hacid_dh | 2-Hacid_dh_C | NAD_binding_2 |
| CAZyme | HRGMv2_3004_15 | HRGMv2_3004_15_19 | 18267 | 19544 | - | GH18 |
Gene ID: HRGMv2_3004_15_16
Type: TC
Location: 15579 - 16094 (+)
Type: TC
Location: 15579 - 16094 (+)
Gene ID: HRGMv2_3004_15_17
Type: TC
Location: 16099 - 17166 (+)
Type: TC
Location: 16099 - 17166 (+)
Gene ID: HRGMv2_3004_15_18
Type: pfam
Location: 17163 - 18152 (+)
Type: pfam
Location: 17163 - 18152 (+)
Gene ID: HRGMv2_3004_15_19
Type: CAZyme
Location: 18267 - 19544 (-)
Type: CAZyme
Location: 18267 - 19544 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Dysosmobacter
Species
Dysosmobacter sp018228705
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.