dbCAN Logo

Cluster: HRGMv2_2998_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2998_1 HRGMv2_2998_1_462 496430 497800 - 2.A.66.1.13
TC HRGMv2_2998_1 HRGMv2_2998_1_463 498089 502057 + 2.A.6.3.6
TC HRGMv2_2998_1 HRGMv2_2998_1_464 502092 503024 + 2.A.19.5.2
pfam HRGMv2_2998_1 HRGMv2_2998_1_465 503070 503813 - HGSNAT_cat
TF HRGMv2_2998_1 HRGMv2_2998_1_466 503817 504512 - SfsA
CAZyme HRGMv2_2998_1 HRGMv2_2998_1_467 504655 505413 + CBM13
TC HRGMv2_2998_1 HRGMv2_2998_1_468 505558 506913 + 5.A.1.2.1
Gene ID: HRGMv2_2998_1_462
Type: TC
Location: 496430 - 497800 (-)
Gene ID: HRGMv2_2998_1_463
Type: TC
Location: 498089 - 502057 (+)
Gene ID: HRGMv2_2998_1_464
Type: TC
Location: 502092 - 503024 (+)
Gene ID: HRGMv2_2998_1_465
Type: pfam
Location: 503070 - 503813 (-)
Gene ID: HRGMv2_2998_1_466
Type: TF
Location: 503817 - 504512 (-)
Gene ID: HRGMv2_2998_1_467
Type: CAZyme
Location: 504655 - 505413 (+)
Gene ID: HRGMv2_2998_1_468
Type: TC
Location: 505558 - 506913 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List