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Cluster: HRGMv2_2998_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2998_5 HRGMv2_2998_5_76 79441 81666 + 3.A.7.16.1
STP HRGMv2_2998_5 HRGMv2_2998_5_77 81657 82367 + Pribosyltran
TC HRGMv2_2998_5 HRGMv2_2998_5_78 82459 83481 + 9.B.157.1.1
pfam HRGMv2_2998_5 HRGMv2_2998_5_79 83662 84060 + OAD_gamma
TC HRGMv2_2998_5 HRGMv2_2998_5_80 84074 85321 + 3.B.1.1.2
pfam HRGMv2_2998_5 HRGMv2_2998_5_81 85461 86576 - APH
TF HRGMv2_2998_5 HRGMv2_2998_5_82 86729 87598 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2998_5 HRGMv2_2998_5_83 87911 90079 + GH112
TC HRGMv2_2998_5 HRGMv2_2998_5_84 90388 92136 + 8.A.7.1.1
Gene ID: HRGMv2_2998_5_76
Type: TC
Location: 79441 - 81666 (+)
Gene ID: HRGMv2_2998_5_77
Type: STP
Location: 81657 - 82367 (+)
Gene ID: HRGMv2_2998_5_78
Type: TC
Location: 82459 - 83481 (+)
Gene ID: HRGMv2_2998_5_79
Type: pfam
Location: 83662 - 84060 (+)
Gene ID: HRGMv2_2998_5_80
Type: TC
Location: 84074 - 85321 (+)
Gene ID: HRGMv2_2998_5_81
Type: pfam
Location: 85461 - 86576 (-)
Gene ID: HRGMv2_2998_5_82
Type: TF
Location: 86729 - 87598 (-)
Gene ID: HRGMv2_2998_5_83
Type: CAZyme
Location: 87911 - 90079 (+)
Gene ID: HRGMv2_2998_5_84
Type: TC
Location: 90388 - 92136 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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