dbCAN Logo

Cluster: HRGMv2_2998_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2998_4 HRGMv2_2998_4_59 72557 73915 + 2.A.1.24.4
pfam HRGMv2_2998_4 HRGMv2_2998_4_60 74027 75139 + Zn_dep_PLPC
pfam HRGMv2_2998_4 HRGMv2_2998_4_61 75188 76030 - NYN | OST-HTH
TC HRGMv2_2998_4 HRGMv2_2998_4_62 76261 76989 + 3.A.1.4.6
pfam HRGMv2_2998_4 HRGMv2_2998_4_63 76986 77906 + SUFBD_core
TC HRGMv2_2998_4 HRGMv2_2998_4_64 77949 79718 - 2.A.58.2.2
TC HRGMv2_2998_4 HRGMv2_2998_4_65 79964 81748 - 2.A.58.2.2
CAZyme HRGMv2_2998_4 HRGMv2_2998_4_66 82209 83132 - CE4
Gene ID: HRGMv2_2998_4_59
Type: TC
Location: 72557 - 73915 (+)
Gene ID: HRGMv2_2998_4_60
Type: pfam
Location: 74027 - 75139 (+)
Gene ID: HRGMv2_2998_4_61
Type: pfam
Location: 75188 - 76030 (-)
Gene ID: HRGMv2_2998_4_62
Type: TC
Location: 76261 - 76989 (+)
Gene ID: HRGMv2_2998_4_63
Type: pfam
Location: 76986 - 77906 (+)
Gene ID: HRGMv2_2998_4_64
Type: TC
Location: 77949 - 79718 (-)
Gene ID: HRGMv2_2998_4_65
Type: TC
Location: 79964 - 81748 (-)
Gene ID: HRGMv2_2998_4_66
Type: CAZyme
Location: 82209 - 83132 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List