Cluster: HRGMv2_2998_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2998
- CGC Family ID: CGCFAM_00045
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2998_4 | HRGMv2_2998_4_18 | 26199 | 28463 | - | CBM20 | GH13_2 |
| TF | HRGMv2_2998_4 | HRGMv2_2998_4_19 | 28510 | 29523 | - | LacI |
| CAZyme | HRGMv2_2998_4 | HRGMv2_2998_4_20 | 29523 | 31082 | - | GH13_20 |
| TC | HRGMv2_2998_4 | HRGMv2_2998_4_21 | 31273 | 32127 | - | 3.A.1.1.2 |
| TC | HRGMv2_2998_4 | HRGMv2_2998_4_22 | 32130 | 33020 | - | 3.A.1.1.2 |
| TC | HRGMv2_2998_4 | HRGMv2_2998_4_23 | 33032 | 34243 | - | 3.A.1.1.16 |
Gene ID: HRGMv2_2998_4_18
Type: CAZyme
Location: 26199 - 28463 (-)
Type: CAZyme
Location: 26199 - 28463 (-)
Gene ID: HRGMv2_2998_4_19
Type: TF
Location: 28510 - 29523 (-)
Type: TF
Location: 28510 - 29523 (-)
Gene ID: HRGMv2_2998_4_20
Type: CAZyme
Location: 29523 - 31082 (-)
Type: CAZyme
Location: 29523 - 31082 (-)
Gene ID: HRGMv2_2998_4_21
Type: TC
Location: 31273 - 32127 (-)
Type: TC
Location: 31273 - 32127 (-)
Gene ID: HRGMv2_2998_4_22
Type: TC
Location: 32130 - 33020 (-)
Type: TC
Location: 32130 - 33020 (-)
Gene ID: HRGMv2_2998_4_23
Type: TC
Location: 33032 - 34243 (-)
Type: TC
Location: 33032 - 34243 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella excrementavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2998_4_22 | vegetarian > vegan | 1.59977 | 0.01142 |