Cluster: HRGMv2_2998_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2998
- CGC Family ID: CGCFAM_00004
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2998_3 | HRGMv2_2998_3_102 | 108075 | 108650 | + | 4.F.1.1.8 |
| CAZyme | HRGMv2_2998_3 | HRGMv2_2998_3_103 | 108919 | 110925 | + | CBM48 | GH13_9 |
| pfam | HRGMv2_2998_3 | HRGMv2_2998_3_104 | 110994 | 112208 | + | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2998_3 | HRGMv2_2998_3_105 | 112202 | 113326 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2998_3 | HRGMv2_2998_3_106 | 113423 | 114841 | + | GT5 |
Gene ID: HRGMv2_2998_3_102
Type: TC
Location: 108075 - 108650 (+)
Type: TC
Location: 108075 - 108650 (+)
Gene ID: HRGMv2_2998_3_103
Type: CAZyme
Location: 108919 - 110925 (+)
Type: CAZyme
Location: 108919 - 110925 (+)
Gene ID: HRGMv2_2998_3_104
Type: pfam
Location: 110994 - 112208 (+)
Type: pfam
Location: 110994 - 112208 (+)
Gene ID: HRGMv2_2998_3_105
Type: pfam
Location: 112202 - 113326 (+)
Type: pfam
Location: 112202 - 113326 (+)
Gene ID: HRGMv2_2998_3_106
Type: CAZyme
Location: 113423 - 114841 (+)
Type: CAZyme
Location: 113423 - 114841 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fournierella
Species
Fournierella excrementavium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.