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Cluster: HRGMv2_2996_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2996_1 HRGMv2_2996_1_294 305003 305899 + 3.A.2.1.5
TC HRGMv2_2996_1 HRGMv2_2996_1_295 305893 306174 + 3.A.2.1.2
pfam HRGMv2_2996_1 HRGMv2_2996_1_296 306198 306707 + ATP-synt_B
pfam HRGMv2_2996_1 HRGMv2_2996_1_297 306682 307230 + OSCP
TC HRGMv2_2996_1 HRGMv2_2996_1_298 307227 308720 + 3.A.2.1.5
TC HRGMv2_2996_1 HRGMv2_2996_1_299 308730 309536 + 3.A.2.1.5
TC HRGMv2_2996_1 HRGMv2_2996_1_300 309551 310945 + 3.A.2.1.5
pfam HRGMv2_2996_1 HRGMv2_2996_1_301 310952 311242 + ATP-synt_DE_N
CAZyme HRGMv2_2996_1 HRGMv2_2996_1_302 311494 314220 - GH3
TF HRGMv2_2996_1 HRGMv2_2996_1_303 314321 315097 + HTH_AraC
TC HRGMv2_2996_1 HRGMv2_2996_1_304 315131 315949 - 3.A.1.24.5
TC HRGMv2_2996_1 HRGMv2_2996_1_305 315966 316676 - 3.A.1.24.5
TC HRGMv2_2996_1 HRGMv2_2996_1_306 316677 317666 - 3.A.1.24.2
Gene ID: HRGMv2_2996_1_294
Type: TC
Location: 305003 - 305899 (+)
Gene ID: HRGMv2_2996_1_295
Type: TC
Location: 305893 - 306174 (+)
Gene ID: HRGMv2_2996_1_296
Type: pfam
Location: 306198 - 306707 (+)
Gene ID: HRGMv2_2996_1_297
Type: pfam
Location: 306682 - 307230 (+)
Gene ID: HRGMv2_2996_1_298
Type: TC
Location: 307227 - 308720 (+)
Gene ID: HRGMv2_2996_1_299
Type: TC
Location: 308730 - 309536 (+)
Gene ID: HRGMv2_2996_1_300
Type: TC
Location: 309551 - 310945 (+)
Gene ID: HRGMv2_2996_1_301
Type: pfam
Location: 310952 - 311242 (+)
Gene ID: HRGMv2_2996_1_302
Type: CAZyme
Location: 311494 - 314220 (-)
Gene ID: HRGMv2_2996_1_303
Type: TF
Location: 314321 - 315097 (+)
Gene ID: HRGMv2_2996_1_304
Type: TC
Location: 315131 - 315949 (-)
Gene ID: HRGMv2_2996_1_305
Type: TC
Location: 315966 - 316676 (-)
Gene ID: HRGMv2_2996_1_306
Type: TC
Location: 316677 - 317666 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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