dbCAN Logo

Cluster: HRGMv2_2996_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2996_3 HRGMv2_2996_3_122 134577 136118 - 2.A.21.2.5
STP HRGMv2_2996_3 HRGMv2_2996_3_123 136221 136847 - SIS
pfam HRGMv2_2996_3 HRGMv2_2996_3_124 136860 137810 - ROK
CAZyme HRGMv2_2996_3 HRGMv2_2996_3_125 137945 140905 + GH106
TC HRGMv2_2996_3 HRGMv2_2996_3_126 141036 142790 + 2.A.58.2.2
pfam HRGMv2_2996_3 HRGMv2_2996_3_127 142832 144343 - LysM | SipL | SipL
TF HRGMv2_2996_3 HRGMv2_2996_3_128 144458 144733 - Trp_repressor
TC HRGMv2_2996_3 HRGMv2_2996_3_129 144744 145502 - 3.A.1.3.14
TC HRGMv2_2996_3 HRGMv2_2996_3_130 145514 146173 - 3.A.1.3.14
Gene ID: HRGMv2_2996_3_122
Type: TC
Location: 134577 - 136118 (-)
Gene ID: HRGMv2_2996_3_123
Type: STP
Location: 136221 - 136847 (-)
Gene ID: HRGMv2_2996_3_124
Type: pfam
Location: 136860 - 137810 (-)
Gene ID: HRGMv2_2996_3_125
Type: CAZyme
Location: 137945 - 140905 (+)
Gene ID: HRGMv2_2996_3_126
Type: TC
Location: 141036 - 142790 (+)
Gene ID: HRGMv2_2996_3_127
Type: pfam
Location: 142832 - 144343 (-)
Gene ID: HRGMv2_2996_3_128
Type: TF
Location: 144458 - 144733 (-)
Gene ID: HRGMv2_2996_3_129
Type: TC
Location: 144744 - 145502 (-)
Gene ID: HRGMv2_2996_3_130
Type: TC
Location: 145514 - 146173 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List