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Cluster: HRGMv2_2995_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2995_18 HRGMv2_2995_18_34 38806 39747 - GT2
pfam HRGMv2_2995_18 HRGMv2_2995_18_35 39740 40864 - DAO
pfam HRGMv2_2995_18 HRGMv2_2995_18_36 40884 42947 - PMT_2
CAZyme HRGMv2_2995_18 HRGMv2_2995_18_37 42979 43776 - GT2
pfam HRGMv2_2995_18 HRGMv2_2995_18_38 43773 44549 - AP_endonuc_2
NULL(UNKNOWN) HRGMv2_2995_18 HRGMv2_2995_18_39 44562 45491 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2995_18 HRGMv2_2995_18_40 45566 46324 - 3.A.1.3.15
TC HRGMv2_2995_18 HRGMv2_2995_18_41 46342 46998 - 3.A.1.3.15
TC HRGMv2_2995_18 HRGMv2_2995_18_42 47082 47942 - 3.A.1.3.1
Gene ID: HRGMv2_2995_18_34
Type: CAZyme
Location: 38806 - 39747 (-)
Gene ID: HRGMv2_2995_18_35
Type: pfam
Location: 39740 - 40864 (-)
Gene ID: HRGMv2_2995_18_36
Type: pfam
Location: 40884 - 42947 (-)
Gene ID: HRGMv2_2995_18_37
Type: CAZyme
Location: 42979 - 43776 (-)
Gene ID: HRGMv2_2995_18_38
Type: pfam
Location: 43773 - 44549 (-)
Gene ID: HRGMv2_2995_18_39
Type:
Location: 44562 - 45491 (-)
Gene ID: HRGMv2_2995_18_40
Type: TC
Location: 45566 - 46324 (-)
Gene ID: HRGMv2_2995_18_41
Type: TC
Location: 46342 - 46998 (-)
Gene ID: HRGMv2_2995_18_42
Type: TC
Location: 47082 - 47942 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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