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Cluster: HRGMv2_2995_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2995_9 HRGMv2_2995_9_49 45491 46126 - 1.A.16.5.1
pfam HRGMv2_2995_9 HRGMv2_2995_9_50 46308 46955 - Hexapep | Mac | Hexapep_2 | Hexapep_2
NULL(UNKNOWN) HRGMv2_2995_9 HRGMv2_2995_9_51 46971 47516 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2995_9 HRGMv2_2995_9_52 47753 50002 - GH13_42
CAZyme HRGMv2_2995_9 HRGMv2_2995_9_53 50127 52496 - GH13_42
CAZyme HRGMv2_2995_9 HRGMv2_2995_9_54 52514 54364 - CBM26
pfam HRGMv2_2995_9 HRGMv2_2995_9_55 54591 54974 - DUF4363
pfam HRGMv2_2995_9 HRGMv2_2995_9_56 54971 55648 - DUF421
TC HRGMv2_2995_9 HRGMv2_2995_9_57 55765 57291 + 9.A.11.1.2
Gene ID: HRGMv2_2995_9_49
Type: TC
Location: 45491 - 46126 (-)
Gene ID: HRGMv2_2995_9_50
Type: pfam
Location: 46308 - 46955 (-)
Gene ID: HRGMv2_2995_9_51
Type:
Location: 46971 - 47516 (-)
Gene ID: HRGMv2_2995_9_52
Type: CAZyme
Location: 47753 - 50002 (-)
Gene ID: HRGMv2_2995_9_53
Type: CAZyme
Location: 50127 - 52496 (-)
Gene ID: HRGMv2_2995_9_54
Type: CAZyme
Location: 52514 - 54364 (-)
Gene ID: HRGMv2_2995_9_55
Type: pfam
Location: 54591 - 54974 (-)
Gene ID: HRGMv2_2995_9_56
Type: pfam
Location: 54971 - 55648 (-)
Gene ID: HRGMv2_2995_9_57
Type: TC
Location: 55765 - 57291 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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