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Cluster: HRGMv2_2995_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2995_4 HRGMv2_2995_4_46 63331 64362 - GT2
TC HRGMv2_2995_4 HRGMv2_2995_4_47 64395 65516 - 4.D.2.1.5
CAZyme HRGMv2_2995_4 HRGMv2_2995_4_48 65662 66789 - GT28
pfam HRGMv2_2995_4 HRGMv2_2995_4_49 67116 69074 + VanW
pfam HRGMv2_2995_4 HRGMv2_2995_4_50 69543 70211 - PhoU | PhoU
TC HRGMv2_2995_4 HRGMv2_2995_4_51 70211 70960 - 3.A.1.7.5
TC HRGMv2_2995_4 HRGMv2_2995_4_52 70994 71896 - 3.A.1.7.5
TC HRGMv2_2995_4 HRGMv2_2995_4_53 71889 72758 - 3.A.1.7.5
Gene ID: HRGMv2_2995_4_46
Type: CAZyme
Location: 63331 - 64362 (-)
Gene ID: HRGMv2_2995_4_47
Type: TC
Location: 64395 - 65516 (-)
Gene ID: HRGMv2_2995_4_48
Type: CAZyme
Location: 65662 - 66789 (-)
Gene ID: HRGMv2_2995_4_49
Type: pfam
Location: 67116 - 69074 (+)
Gene ID: HRGMv2_2995_4_50
Type: pfam
Location: 69543 - 70211 (-)
Gene ID: HRGMv2_2995_4_51
Type: TC
Location: 70211 - 70960 (-)
Gene ID: HRGMv2_2995_4_52
Type: TC
Location: 70994 - 71896 (-)
Gene ID: HRGMv2_2995_4_53
Type: TC
Location: 71889 - 72758 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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