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Cluster: HRGMv2_2995_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2995_33 HRGMv2_2995_33_11 10067 10645 - CBM13
pfam HRGMv2_2995_33 HRGMv2_2995_33_12 10605 12269 - GBS_Bsp-like
NULL(UNKNOWN) HRGMv2_2995_33 HRGMv2_2995_33_13 12624 12899 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2995_33 HRGMv2_2995_33_14 13295 16207 - 3.A.5.1.3
pfam HRGMv2_2995_33 HRGMv2_2995_33_15 16458 17846 - Transpeptidase
TC HRGMv2_2995_33 HRGMv2_2995_33_16 17915 19612 - 2.A.103.1.7
TC HRGMv2_2995_33 HRGMv2_2995_33_17 19753 20292 - 3.A.1.25.5
pfam HRGMv2_2995_33 HRGMv2_2995_33_18 20372 21946 - ABC_trans_CmpB | ABC_trans_CmpB
pfam HRGMv2_2995_33 HRGMv2_2995_33_19 21998 22837 - QRPTase_C | QRPTase_N
TC HRGMv2_2995_33 HRGMv2_2995_33_20 22859 24310 - 3.D.10.1.4
Gene ID: HRGMv2_2995_33_11
Type: CAZyme
Location: 10067 - 10645 (-)
Gene ID: HRGMv2_2995_33_12
Type: pfam
Location: 10605 - 12269 (-)
Gene ID: HRGMv2_2995_33_13
Type:
Location: 12624 - 12899 (-)
Gene ID: HRGMv2_2995_33_14
Type: TC
Location: 13295 - 16207 (-)
Gene ID: HRGMv2_2995_33_15
Type: pfam
Location: 16458 - 17846 (-)
Gene ID: HRGMv2_2995_33_16
Type: TC
Location: 17915 - 19612 (-)
Gene ID: HRGMv2_2995_33_17
Type: TC
Location: 19753 - 20292 (-)
Gene ID: HRGMv2_2995_33_18
Type: pfam
Location: 20372 - 21946 (-)
Gene ID: HRGMv2_2995_33_19
Type: pfam
Location: 21998 - 22837 (-)
Gene ID: HRGMv2_2995_33_20
Type: TC
Location: 22859 - 24310 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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