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Cluster: HRGMv2_2995_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2995_28 HRGMv2_2995_28_11 8302 9309 + GT8
CAZyme HRGMv2_2995_28 HRGMv2_2995_28_12 9314 10297 + GT2
pfam HRGMv2_2995_28 HRGMv2_2995_28_13 10309 11406 + PS_pyruv_trans
TC HRGMv2_2995_28 HRGMv2_2995_28_14 11411 12442 + 9.B.97.1.2
CAZyme HRGMv2_2995_28 HRGMv2_2995_28_15 12461 13591 + GT4
CAZyme HRGMv2_2995_28 HRGMv2_2995_28_16 13588 14646 + GT4
Gene ID: HRGMv2_2995_28_11
Type: CAZyme
Location: 8302 - 9309 (+)
Gene ID: HRGMv2_2995_28_12
Type: CAZyme
Location: 9314 - 10297 (+)
Gene ID: HRGMv2_2995_28_13
Type: pfam
Location: 10309 - 11406 (+)
Gene ID: HRGMv2_2995_28_14
Type: TC
Location: 11411 - 12442 (+)
Gene ID: HRGMv2_2995_28_15
Type: CAZyme
Location: 12461 - 13591 (+)
Gene ID: HRGMv2_2995_28_16
Type: CAZyme
Location: 13588 - 14646 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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