Cluster: HRGMv2_2993_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate: alpha-glucan
- Genome ID: HRGMv2_2993
- CGC Family ID: CGCFAM_00004
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2993_3 | HRGMv2_2993_3_109 | 116365 | 117009 | - | 1.C.113.1.1 |
| pfam | HRGMv2_2993_3 | HRGMv2_2993_3_110 | 117176 | 117733 | + | DUF1836 |
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_111 | 117813 | 120242 | - | GT35 |
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_112 | 120322 | 121755 | - | GT5 |
| pfam | HRGMv2_2993_3 | HRGMv2_2993_3_113 | 121894 | 123012 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_2993_3 | HRGMv2_2993_3_114 | 123009 | 124217 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_115 | 124242 | 126362 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2993_3_109
Type: TC
Location: 116365 - 117009 (-)
Type: TC
Location: 116365 - 117009 (-)
Gene ID: HRGMv2_2993_3_110
Type: pfam
Location: 117176 - 117733 (+)
Type: pfam
Location: 117176 - 117733 (+)
Gene ID: HRGMv2_2993_3_111
Type: CAZyme
Location: 117813 - 120242 (-)
Type: CAZyme
Location: 117813 - 120242 (-)
Gene ID: HRGMv2_2993_3_112
Type: CAZyme
Location: 120322 - 121755 (-)
Type: CAZyme
Location: 120322 - 121755 (-)
Gene ID: HRGMv2_2993_3_113
Type: pfam
Location: 121894 - 123012 (-)
Type: pfam
Location: 121894 - 123012 (-)
Gene ID: HRGMv2_2993_3_114
Type: pfam
Location: 123009 - 124217 (-)
Type: pfam
Location: 123009 - 124217 (-)
Gene ID: HRGMv2_2993_3_115
Type: CAZyme
Location: 124242 - 126362 (-)
Type: CAZyme
Location: 124242 - 126362 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp958423465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.