Cluster: HRGMv2_2993_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2993
- CGC Family ID: CGCFAM_02378
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_52 | 57017 | 59287 | + | GH2 |
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_53 | 59290 | 61752 | + | GH3 |
| TC | HRGMv2_2993_3 | HRGMv2_2993_3_54 | 61787 | 63517 | + | 2.A.2.3.3 |
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_55 | 63514 | 65007 | + | GH43_35 |
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_56 | 65004 | 66548 | + | GH39 |
| CAZyme | HRGMv2_2993_3 | HRGMv2_2993_3_57 | 66551 | 67858 | + | GH1 |
Gene ID: HRGMv2_2993_3_52
Type: CAZyme
Location: 57017 - 59287 (+)
Type: CAZyme
Location: 57017 - 59287 (+)
Gene ID: HRGMv2_2993_3_53
Type: CAZyme
Location: 59290 - 61752 (+)
Type: CAZyme
Location: 59290 - 61752 (+)
Gene ID: HRGMv2_2993_3_54
Type: TC
Location: 61787 - 63517 (+)
Type: TC
Location: 61787 - 63517 (+)
Gene ID: HRGMv2_2993_3_55
Type: CAZyme
Location: 63514 - 65007 (+)
Type: CAZyme
Location: 63514 - 65007 (+)
Gene ID: HRGMv2_2993_3_56
Type: CAZyme
Location: 65004 - 66548 (+)
Type: CAZyme
Location: 65004 - 66548 (+)
Gene ID: HRGMv2_2993_3_57
Type: CAZyme
Location: 66551 - 67858 (+)
Type: CAZyme
Location: 66551 - 67858 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp958423465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.