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Cluster: HRGMv2_2993_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2993_2 HRGMv2_2993_2_184 201893 202777 - 3.A.1.1.34
TC HRGMv2_2993_2 HRGMv2_2993_2_185 202793 203707 - 3.A.1.1.20
STP HRGMv2_2993_2 HRGMv2_2993_2_186 203794 205188 - SBP_bac_1
pfam HRGMv2_2993_2 HRGMv2_2993_2_187 205438 206088 + Lipase_GDSL | Lipase_GDSL_2
TC HRGMv2_2993_2 HRGMv2_2993_2_188 206161 206820 - 9.B.28.1.8
TF HRGMv2_2993_2 HRGMv2_2993_2_189 206833 207693 - HTH_6
TC HRGMv2_2993_2 HRGMv2_2993_2_190 207916 209283 + 2.A.3.8.12
CAZyme HRGMv2_2993_2 HRGMv2_2993_2_191 209456 210562 - CE9
NULL(UNKNOWN) HRGMv2_2993_2 HRGMv2_2993_2_192 210576 211958 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2993_2 HRGMv2_2993_2_193 212176 213378 + GlcNAc_2-epim
CAZyme HRGMv2_2993_2 HRGMv2_2993_2_194 213876 215201 + GH51_1
Gene ID: HRGMv2_2993_2_184
Type: TC
Location: 201893 - 202777 (-)
Gene ID: HRGMv2_2993_2_185
Type: TC
Location: 202793 - 203707 (-)
Gene ID: HRGMv2_2993_2_186
Type: STP
Location: 203794 - 205188 (-)
Gene ID: HRGMv2_2993_2_187
Type: pfam
Location: 205438 - 206088 (+)
Gene ID: HRGMv2_2993_2_188
Type: TC
Location: 206161 - 206820 (-)
Gene ID: HRGMv2_2993_2_189
Type: TF
Location: 206833 - 207693 (-)
Gene ID: HRGMv2_2993_2_190
Type: TC
Location: 207916 - 209283 (+)
Gene ID: HRGMv2_2993_2_191
Type: CAZyme
Location: 209456 - 210562 (-)
Gene ID: HRGMv2_2993_2_192
Type:
Location: 210576 - 211958 (-)
Gene ID: HRGMv2_2993_2_193
Type: pfam
Location: 212176 - 213378 (+)
Gene ID: HRGMv2_2993_2_194
Type: CAZyme
Location: 213876 - 215201 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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