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Cluster: HRGMv2_2993_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2993_21 HRGMv2_2993_21_8 11009 12838 + GH33
TC HRGMv2_2993_21 HRGMv2_2993_21_9 12925 14613 + 3.A.1.5.28
TC HRGMv2_2993_21 HRGMv2_2993_21_10 14789 15745 + 3.A.1.5.20
TC HRGMv2_2993_21 HRGMv2_2993_21_11 15765 16655 + 3.A.1.5.20
TC HRGMv2_2993_21 HRGMv2_2993_21_12 16668 17684 + 3.A.1.5.12
TC HRGMv2_2993_21 HRGMv2_2993_21_13 17686 18693 + 3.A.1.5.20
CAZyme HRGMv2_2993_21 HRGMv2_2993_21_14 18727 20178 + GH165
Gene ID: HRGMv2_2993_21_8
Type: CAZyme
Location: 11009 - 12838 (+)
Gene ID: HRGMv2_2993_21_9
Type: TC
Location: 12925 - 14613 (+)
Gene ID: HRGMv2_2993_21_10
Type: TC
Location: 14789 - 15745 (+)
Gene ID: HRGMv2_2993_21_11
Type: TC
Location: 15765 - 16655 (+)
Gene ID: HRGMv2_2993_21_12
Type: TC
Location: 16668 - 17684 (+)
Gene ID: HRGMv2_2993_21_13
Type: TC
Location: 17686 - 18693 (+)
Gene ID: HRGMv2_2993_21_14
Type: CAZyme
Location: 18727 - 20178 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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