Cluster: HRGMv2_2993_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2993
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2993_16 | HRGMv2_2993_16_19 | 22375 | 22959 | - | 2.A.87.1.3 |
| pfam | HRGMv2_2993_16 | HRGMv2_2993_16_20 | 23286 | 23789 | + | YpsA |
| TC | HRGMv2_2993_16 | HRGMv2_2993_16_21 | 23840 | 25204 | - | 2.A.66.1.33 |
| TC | HRGMv2_2993_16 | HRGMv2_2993_16_22 | 25460 | 26104 | - | 2.A.38.4.3 |
| TC | HRGMv2_2993_16 | HRGMv2_2993_16_23 | 26113 | 27459 | - | 2.A.38.4.1 |
| CAZyme | HRGMv2_2993_16 | HRGMv2_2993_16_24 | 27629 | 28651 | - | CE4 |
Gene ID: HRGMv2_2993_16_19
Type: TC
Location: 22375 - 22959 (-)
Type: TC
Location: 22375 - 22959 (-)
Gene ID: HRGMv2_2993_16_20
Type: pfam
Location: 23286 - 23789 (+)
Type: pfam
Location: 23286 - 23789 (+)
Gene ID: HRGMv2_2993_16_21
Type: TC
Location: 23840 - 25204 (-)
Type: TC
Location: 23840 - 25204 (-)
Gene ID: HRGMv2_2993_16_22
Type: TC
Location: 25460 - 26104 (-)
Type: TC
Location: 25460 - 26104 (-)
Gene ID: HRGMv2_2993_16_23
Type: TC
Location: 26113 - 27459 (-)
Type: TC
Location: 26113 - 27459 (-)
Gene ID: HRGMv2_2993_16_24
Type: CAZyme
Location: 27629 - 28651 (-)
Type: CAZyme
Location: 27629 - 28651 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp958423465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.