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Cluster: HRGMv2_2993_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2993_15 HRGMv2_2993_15_39 45188 47191 + 3.A.1.5.12
TC HRGMv2_2993_15 HRGMv2_2993_15_40 47378 48373 + 3.A.1.5.29
TC HRGMv2_2993_15 HRGMv2_2993_15_41 48378 49514 + 3.A.1.5.29
TC HRGMv2_2993_15 HRGMv2_2993_15_42 49533 50591 + 3.A.1.5.29
TC HRGMv2_2993_15 HRGMv2_2993_15_43 50588 51595 + 3.A.1.5.29
pfam HRGMv2_2993_15 HRGMv2_2993_15_44 51582 52127 + Hydrolase | Hydrolase_like | HAD_2
CAZyme HRGMv2_2993_15 HRGMv2_2993_15_45 52136 53236 + GH105
Gene ID: HRGMv2_2993_15_39
Type: TC
Location: 45188 - 47191 (+)
Gene ID: HRGMv2_2993_15_40
Type: TC
Location: 47378 - 48373 (+)
Gene ID: HRGMv2_2993_15_41
Type: TC
Location: 48378 - 49514 (+)
Gene ID: HRGMv2_2993_15_42
Type: TC
Location: 49533 - 50591 (+)
Gene ID: HRGMv2_2993_15_43
Type: TC
Location: 50588 - 51595 (+)
Gene ID: HRGMv2_2993_15_44
Type: pfam
Location: 51582 - 52127 (+)
Gene ID: HRGMv2_2993_15_45
Type: CAZyme
Location: 52136 - 53236 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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