Cluster: HRGMv2_2993_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2993
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2993_12 | HRGMv2_2993_12_54 | 57612 | 59681 | - | GH24 | GH25 |
| TC | HRGMv2_2993_12 | HRGMv2_2993_12_55 | 59827 | 61224 | - | 2.A.66.1.32 |
| TC | HRGMv2_2993_12 | HRGMv2_2993_12_56 | 61473 | 62939 | + | 2.A.40.2.1 |
| pfam | HRGMv2_2993_12 | HRGMv2_2993_12_57 | 63009 | 63584 | - | 5-FTHF_cyc-lig |
| TC | HRGMv2_2993_12 | HRGMv2_2993_12_58 | 63571 | 64401 | - | 1.A.16.1.3 |
Gene ID: HRGMv2_2993_12_54
Type: CAZyme
Location: 57612 - 59681 (-)
Type: CAZyme
Location: 57612 - 59681 (-)
Gene ID: HRGMv2_2993_12_55
Type: TC
Location: 59827 - 61224 (-)
Type: TC
Location: 59827 - 61224 (-)
Gene ID: HRGMv2_2993_12_56
Type: TC
Location: 61473 - 62939 (+)
Type: TC
Location: 61473 - 62939 (+)
Gene ID: HRGMv2_2993_12_57
Type: pfam
Location: 63009 - 63584 (-)
Type: pfam
Location: 63009 - 63584 (-)
Gene ID: HRGMv2_2993_12_58
Type: TC
Location: 63571 - 64401 (-)
Type: TC
Location: 63571 - 64401 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp958423465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.