Cluster: HRGMv2_2993_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2993
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2993_1 | HRGMv2_2993_1_121 | 127592 | 128596 | + | 3.A.1.14.7 |
| TC | HRGMv2_2993_1 | HRGMv2_2993_1_122 | 128587 | 129351 | + | 3.A.1.14.22 |
| TC | HRGMv2_2993_1 | HRGMv2_2993_1_123 | 129410 | 130735 | - | 2.A.3.8.17 |
| pfam | HRGMv2_2993_1 | HRGMv2_2993_1_124 | 130797 | 131978 | - | MR_MLE_N | MR_MLE_C |
| TF | HRGMv2_2993_1 | HRGMv2_2993_1_125 | 132249 | 132941 | + | GntR |
| CAZyme | HRGMv2_2993_1 | HRGMv2_2993_1_126 | 133040 | 133861 | + | CE4 |
Gene ID: HRGMv2_2993_1_121
Type: TC
Location: 127592 - 128596 (+)
Type: TC
Location: 127592 - 128596 (+)
Gene ID: HRGMv2_2993_1_122
Type: TC
Location: 128587 - 129351 (+)
Type: TC
Location: 128587 - 129351 (+)
Gene ID: HRGMv2_2993_1_123
Type: TC
Location: 129410 - 130735 (-)
Type: TC
Location: 129410 - 130735 (-)
Gene ID: HRGMv2_2993_1_124
Type: pfam
Location: 130797 - 131978 (-)
Type: pfam
Location: 130797 - 131978 (-)
Gene ID: HRGMv2_2993_1_125
Type: TF
Location: 132249 - 132941 (+)
Type: TF
Location: 132249 - 132941 (+)
Gene ID: HRGMv2_2993_1_126
Type: CAZyme
Location: 133040 - 133861 (+)
Type: CAZyme
Location: 133040 - 133861 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp958423465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.