Cluster: HRGMv2_2993_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2993
- CGC Family ID: CGCFAM_00093
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2993_8 | HRGMv2_2993_8_12 | 13519 | 15468 | + | GH31_1 |
| STP | HRGMv2_2993_8 | HRGMv2_2993_8_13 | 15724 | 16290 | + | TetR_N |
| pfam | HRGMv2_2993_8 | HRGMv2_2993_8_14 | 16630 | 17979 | + | Radical_SAM |
| CAZyme | HRGMv2_2993_8 | HRGMv2_2993_8_15 | 18130 | 20475 | - | GH3 |
| CAZyme | HRGMv2_2993_8 | HRGMv2_2993_8_16 | 20472 | 23045 | - | CBM67 | GH78 |
| TC | HRGMv2_2993_8 | HRGMv2_2993_8_17 | 23047 | 24504 | - | 2.A.2.3.6 |
Gene ID: HRGMv2_2993_8_12
Type: CAZyme
Location: 13519 - 15468 (+)
Type: CAZyme
Location: 13519 - 15468 (+)
Gene ID: HRGMv2_2993_8_13
Type: STP
Location: 15724 - 16290 (+)
Type: STP
Location: 15724 - 16290 (+)
Gene ID: HRGMv2_2993_8_14
Type: pfam
Location: 16630 - 17979 (+)
Type: pfam
Location: 16630 - 17979 (+)
Gene ID: HRGMv2_2993_8_15
Type: CAZyme
Location: 18130 - 20475 (-)
Type: CAZyme
Location: 18130 - 20475 (-)
Gene ID: HRGMv2_2993_8_16
Type: CAZyme
Location: 20472 - 23045 (-)
Type: CAZyme
Location: 20472 - 23045 (-)
Gene ID: HRGMv2_2993_8_17
Type: TC
Location: 23047 - 24504 (-)
Type: TC
Location: 23047 - 24504 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Pelethomonas
Species
Pelethomonas sp958423465
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.