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Cluster: HRGMv2_2993_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2993_7 HRGMv2_2993_7_79 93909 96125 - GH78
pfam HRGMv2_2993_7 HRGMv2_2993_7_80 96138 96986 - AP_endonuc_2
CAZyme HRGMv2_2993_7 HRGMv2_2993_7_81 96993 98801 - CBM32 | GH43_28
CAZyme HRGMv2_2993_7 HRGMv2_2993_7_82 98813 101008 - GH2
TF HRGMv2_2993_7 HRGMv2_2993_7_83 101100 102311 + HTH_AraC | HTH_AraC
TC HRGMv2_2993_7 HRGMv2_2993_7_84 102360 103886 - 2.A.2.3.6
CAZyme HRGMv2_2993_7 HRGMv2_2993_7_85 104120 105418 + GH1
pfam HRGMv2_2993_7 HRGMv2_2993_7_86 105521 106996 - Fucose_iso_C
pfam HRGMv2_2993_7 HRGMv2_2993_7_87 107010 108488 - FGGY_N | FGGY_C
TC HRGMv2_2993_7 HRGMv2_2993_7_88 108678 110057 - 1.A.26.1.2
Gene ID: HRGMv2_2993_7_79
Type: CAZyme
Location: 93909 - 96125 (-)
Gene ID: HRGMv2_2993_7_80
Type: pfam
Location: 96138 - 96986 (-)
Gene ID: HRGMv2_2993_7_81
Type: CAZyme
Location: 96993 - 98801 (-)
Gene ID: HRGMv2_2993_7_82
Type: CAZyme
Location: 98813 - 101008 (-)
Gene ID: HRGMv2_2993_7_83
Type: TF
Location: 101100 - 102311 (+)
Gene ID: HRGMv2_2993_7_84
Type: TC
Location: 102360 - 103886 (-)
Gene ID: HRGMv2_2993_7_85
Type: CAZyme
Location: 104120 - 105418 (+)
Gene ID: HRGMv2_2993_7_86
Type: pfam
Location: 105521 - 106996 (-)
Gene ID: HRGMv2_2993_7_87
Type: pfam
Location: 107010 - 108488 (-)
Gene ID: HRGMv2_2993_7_88
Type: TC
Location: 108678 - 110057 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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