Cluster: HRGMv2_2990_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2990
- CGC Family ID: CGCFAM_00621
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2990_8 | HRGMv2_2990_8_7 | 5993 | 7750 | + | GH2 |
| NULL(UNKNOWN) | HRGMv2_2990_8 | HRGMv2_2990_8_8 | 7828 | 9423 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2990_8 | HRGMv2_2990_8_9 | 9423 | 10130 | - | 3.A.1.147.6 |
| pfam | HRGMv2_2990_8 | HRGMv2_2990_8_10 | 10168 | 11073 | - | ABC2_membrane | ABC2_membrane_3 |
| TC | HRGMv2_2990_8 | HRGMv2_2990_8_11 | 11070 | 11984 | - | 3.A.1.105.9 |
Gene ID: HRGMv2_2990_8_7
Type: CAZyme
Location: 5993 - 7750 (+)
Type: CAZyme
Location: 5993 - 7750 (+)
Gene ID: HRGMv2_2990_8_8
Type:
Location: 7828 - 9423 (-)
Type:
Location: 7828 - 9423 (-)
Gene ID: HRGMv2_2990_8_9
Type: TC
Location: 9423 - 10130 (-)
Type: TC
Location: 9423 - 10130 (-)
Gene ID: HRGMv2_2990_8_10
Type: pfam
Location: 10168 - 11073 (-)
Type: pfam
Location: 10168 - 11073 (-)
Gene ID: HRGMv2_2990_8_11
Type: TC
Location: 11070 - 11984 (-)
Type: TC
Location: 11070 - 11984 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UBA644
Genus
HGM12619
Species
HGM12619 sp900753195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.