Cluster: HRGMv2_2990_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2990
- CGC Family ID: CGCFAM_05493
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2990_6 | HRGMv2_2990_6_65 | 63314 | 63883 | + | 2.A.107.1.2 |
| NULL(UNKNOWN) | HRGMv2_2990_6 | HRGMv2_2990_6_66 | 63867 | 64520 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2990_6 | HRGMv2_2990_6_67 | 64591 | 65751 | - | CE4 |
| pfam | HRGMv2_2990_6 | HRGMv2_2990_6_68 | 65773 | 67206 | - | tRNA-synt_2b | HGTP_anticodon | ProRS-C_1 |
| CAZyme | HRGMv2_2990_6 | HRGMv2_2990_6_69 | 67495 | 72447 | + | GH2 |
Gene ID: HRGMv2_2990_6_65
Type: TC
Location: 63314 - 63883 (+)
Type: TC
Location: 63314 - 63883 (+)
Gene ID: HRGMv2_2990_6_66
Type:
Location: 63867 - 64520 (-)
Type:
Location: 63867 - 64520 (-)
Gene ID: HRGMv2_2990_6_67
Type: CAZyme
Location: 64591 - 65751 (-)
Type: CAZyme
Location: 64591 - 65751 (-)
Gene ID: HRGMv2_2990_6_68
Type: pfam
Location: 65773 - 67206 (-)
Type: pfam
Location: 65773 - 67206 (-)
Gene ID: HRGMv2_2990_6_69
Type: CAZyme
Location: 67495 - 72447 (+)
Type: CAZyme
Location: 67495 - 72447 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
UBA644
Genus
HGM12619
Species
HGM12619 sp900753195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.