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Cluster: HRGMv2_2990_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2990_13 HRGMv2_2990_13_37 39643 41268 + GH110
CAZyme HRGMv2_2990_13 HRGMv2_2990_13_38 41262 42878 + GH110
TC HRGMv2_2990_13 HRGMv2_2990_13_39 43036 44661 - 3.A.1.1.16
TC HRGMv2_2990_13 HRGMv2_2990_13_40 44665 46494 - 3.A.1.20.2
NULL(UNKNOWN) HRGMv2_2990_13 HRGMv2_2990_13_41 46554 47879 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2990_13 HRGMv2_2990_13_42 48364 49299 - Amidase_2
TC HRGMv2_2990_13 HRGMv2_2990_13_43 49313 49816 - 1.E.19.1.11
CAZyme HRGMv2_2990_13 HRGMv2_2990_13_44 49944 50789 + CE4
Gene ID: HRGMv2_2990_13_37
Type: CAZyme
Location: 39643 - 41268 (+)
Gene ID: HRGMv2_2990_13_38
Type: CAZyme
Location: 41262 - 42878 (+)
Gene ID: HRGMv2_2990_13_39
Type: TC
Location: 43036 - 44661 (-)
Gene ID: HRGMv2_2990_13_40
Type: TC
Location: 44665 - 46494 (-)
Gene ID: HRGMv2_2990_13_41
Type:
Location: 46554 - 47879 (-)
Gene ID: HRGMv2_2990_13_42
Type: pfam
Location: 48364 - 49299 (-)
Gene ID: HRGMv2_2990_13_43
Type: TC
Location: 49313 - 49816 (-)
Gene ID: HRGMv2_2990_13_44
Type: CAZyme
Location: 49944 - 50789 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
UBA644
→
Genus
HGM12619
→
Species
HGM12619 sp900753195

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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