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Cluster: HRGMv2_2987_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2987_17 HRGMv2_2987_17_8 6118 7956 - 2.A.16.2.2
pfam HRGMv2_2987_17 HRGMv2_2987_17_9 8155 9525 - Transglut_core
TC HRGMv2_2987_17 HRGMv2_2987_17_10 9538 10875 - 1.A.26.1.2
pfam HRGMv2_2987_17 HRGMv2_2987_17_11 11536 12597 - UxuA
peptidase HRGMv2_2987_17 HRGMv2_2987_17_12 12764 13540 - S33.UNW
CAZyme HRGMv2_2987_17 HRGMv2_2987_17_13 13814 14863 + GH179
pfam HRGMv2_2987_17 HRGMv2_2987_17_14 14936 15577 - Hexapep | Mac | Hexapep_2 | Hexapep_2
NULL(UNKNOWN) HRGMv2_2987_17 HRGMv2_2987_17_15 15590 15976 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2987_17 HRGMv2_2987_17_16 16004 18064 - GH42
Gene ID: HRGMv2_2987_17_8
Type: TC
Location: 6118 - 7956 (-)
Gene ID: HRGMv2_2987_17_9
Type: pfam
Location: 8155 - 9525 (-)
Gene ID: HRGMv2_2987_17_10
Type: TC
Location: 9538 - 10875 (-)
Gene ID: HRGMv2_2987_17_11
Type: pfam
Location: 11536 - 12597 (-)
Gene ID: HRGMv2_2987_17_12
Type: peptidase
Location: 12764 - 13540 (-)
Gene ID: HRGMv2_2987_17_13
Type: CAZyme
Location: 13814 - 14863 (+)
Gene ID: HRGMv2_2987_17_14
Type: pfam
Location: 14936 - 15577 (-)
Gene ID: HRGMv2_2987_17_15
Type:
Location: 15590 - 15976 (-)
Gene ID: HRGMv2_2987_17_16
Type: CAZyme
Location: 16004 - 18064 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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