Cluster: HRGMv2_2987_CGC7
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_2987
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2987_16 | HRGMv2_2987_16_133 | 143045 | 144895 | + | 1.A.33.1.4 |
| pfam | HRGMv2_2987_16 | HRGMv2_2987_16_134 | 144979 | 146133 | + | DnaJ | DnaJ_CXXCXGXG | DnaJ_C |
| pfam | HRGMv2_2987_16 | HRGMv2_2987_16_135 | 146684 | 147808 | + | DUF3048 | DUF3048_C |
| TC | HRGMv2_2987_16 | HRGMv2_2987_16_136 | 148035 | 149909 | + | 9.B.18.2.1 |
| pfam | HRGMv2_2987_16 | HRGMv2_2987_16_137 | 149936 | 151246 | + | DegT_DnrJ_EryC1 |
| TC | HRGMv2_2987_16 | HRGMv2_2987_16_138 | 151258 | 151926 | + | 9.B.18.1.2 |
| pfam | HRGMv2_2987_16 | HRGMv2_2987_16_139 | 151941 | 152591 | + | Hexapep | PglD_N |
| TC | HRGMv2_2987_16 | HRGMv2_2987_16_140 | 152747 | 153100 | + | 9.B.18.1.2 |
| pfam | HRGMv2_2987_16 | HRGMv2_2987_16_141 | 153097 | 153975 | + | 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 |
| CAZyme | HRGMv2_2987_16 | HRGMv2_2987_16_142 | 153972 | 155114 | + | GT4 |
| CAZyme | HRGMv2_2987_16 | HRGMv2_2987_16_143 | 155293 | 156294 | + | GT2 |
| CAZyme | HRGMv2_2987_16 | HRGMv2_2987_16_144 | 156327 | 157433 | + | GT4 |
| pfam | HRGMv2_2987_16 | HRGMv2_2987_16_145 | 157438 | 158991 | + | Wzy_C |
| CAZyme | HRGMv2_2987_16 | HRGMv2_2987_16_146 | 158966 | 160087 | + | GT4 |
| CAZyme | HRGMv2_2987_16 | HRGMv2_2987_16_147 | 160091 | 161005 | + | GT2 |
Gene ID: HRGMv2_2987_16_133
Type: TC
Location: 143045 - 144895 (+)
Type: TC
Location: 143045 - 144895 (+)
Gene ID: HRGMv2_2987_16_134
Type: pfam
Location: 144979 - 146133 (+)
Type: pfam
Location: 144979 - 146133 (+)
Gene ID: HRGMv2_2987_16_135
Type: pfam
Location: 146684 - 147808 (+)
Type: pfam
Location: 146684 - 147808 (+)
Gene ID: HRGMv2_2987_16_136
Type: TC
Location: 148035 - 149909 (+)
Type: TC
Location: 148035 - 149909 (+)
Gene ID: HRGMv2_2987_16_137
Type: pfam
Location: 149936 - 151246 (+)
Type: pfam
Location: 149936 - 151246 (+)
Gene ID: HRGMv2_2987_16_138
Type: TC
Location: 151258 - 151926 (+)
Type: TC
Location: 151258 - 151926 (+)
Gene ID: HRGMv2_2987_16_139
Type: pfam
Location: 151941 - 152591 (+)
Type: pfam
Location: 151941 - 152591 (+)
Gene ID: HRGMv2_2987_16_140
Type: TC
Location: 152747 - 153100 (+)
Type: TC
Location: 152747 - 153100 (+)
Gene ID: HRGMv2_2987_16_141
Type: pfam
Location: 153097 - 153975 (+)
Type: pfam
Location: 153097 - 153975 (+)
Gene ID: HRGMv2_2987_16_142
Type: CAZyme
Location: 153972 - 155114 (+)
Type: CAZyme
Location: 153972 - 155114 (+)
Gene ID: HRGMv2_2987_16_143
Type: CAZyme
Location: 155293 - 156294 (+)
Type: CAZyme
Location: 155293 - 156294 (+)
Gene ID: HRGMv2_2987_16_144
Type: CAZyme
Location: 156327 - 157433 (+)
Type: CAZyme
Location: 156327 - 157433 (+)
Gene ID: HRGMv2_2987_16_145
Type: pfam
Location: 157438 - 158991 (+)
Type: pfam
Location: 157438 - 158991 (+)
Gene ID: HRGMv2_2987_16_146
Type: CAZyme
Location: 158966 - 160087 (+)
Type: CAZyme
Location: 158966 - 160087 (+)
Gene ID: HRGMv2_2987_16_147
Type: CAZyme
Location: 160091 - 161005 (+)
Type: CAZyme
Location: 160091 - 161005 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.