Cluster: HRGMv2_2987_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2987
- CGC Family ID: CGCFAM_04511
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2987_13 | HRGMv2_2987_13_17 | 18805 | 19386 | - | 2.A.107.1.2 |
| TF | HRGMv2_2987_13 | HRGMv2_2987_13_18 | 19889 | 20281 | + | GntR |
| TC | HRGMv2_2987_13 | HRGMv2_2987_13_19 | 20278 | 21180 | + | 3.A.1.147.8 |
| NULL(UNKNOWN) | HRGMv2_2987_13 | HRGMv2_2987_13_20 | 21155 | 23107 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2987_13 | HRGMv2_2987_13_21 | 23313 | 25949 | + | CBM67 | GH78 |
| NULL(UNKNOWN) | HRGMv2_2987_13 | HRGMv2_2987_13_22 | 26155 | 26571 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2987_13 | HRGMv2_2987_13_23 | 26635 | 27363 | + | GH175 |
| pfam | HRGMv2_2987_13 | HRGMv2_2987_13_24 | 27445 | 28455 | - | TsaD | HypF_C_2 |
| NULL(UNKNOWN) | HRGMv2_2987_13 | HRGMv2_2987_13_25 | 28452 | 28979 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2987_13 | HRGMv2_2987_13_26 | 28994 | 29815 | - | CE14 |
| CAZyme | HRGMv2_2987_13 | HRGMv2_2987_13_27 | 29983 | 31737 | + | GH2 |
Gene ID: HRGMv2_2987_13_17
Type: TC
Location: 18805 - 19386 (-)
Type: TC
Location: 18805 - 19386 (-)
Gene ID: HRGMv2_2987_13_18
Type: TF
Location: 19889 - 20281 (+)
Type: TF
Location: 19889 - 20281 (+)
Gene ID: HRGMv2_2987_13_19
Type: TC
Location: 20278 - 21180 (+)
Type: TC
Location: 20278 - 21180 (+)
Gene ID: HRGMv2_2987_13_20
Type:
Location: 21155 - 23107 (+)
Type:
Location: 21155 - 23107 (+)
Gene ID: HRGMv2_2987_13_21
Type: CAZyme
Location: 23313 - 25949 (+)
Type: CAZyme
Location: 23313 - 25949 (+)
Gene ID: HRGMv2_2987_13_22
Type:
Location: 26155 - 26571 (+)
Type:
Location: 26155 - 26571 (+)
Gene ID: HRGMv2_2987_13_23
Type: CAZyme
Location: 26635 - 27363 (+)
Type: CAZyme
Location: 26635 - 27363 (+)
Gene ID: HRGMv2_2987_13_24
Type: pfam
Location: 27445 - 28455 (-)
Type: pfam
Location: 27445 - 28455 (-)
Gene ID: HRGMv2_2987_13_25
Type:
Location: 28452 - 28979 (-)
Type:
Location: 28452 - 28979 (-)
Gene ID: HRGMv2_2987_13_26
Type: CAZyme
Location: 28994 - 29815 (-)
Type: CAZyme
Location: 28994 - 29815 (-)
Gene ID: HRGMv2_2987_13_27
Type: CAZyme
Location: 29983 - 31737 (+)
Type: CAZyme
Location: 29983 - 31737 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2987_13_24 | vegetarian > omnivore | 1.00707 | 0.01560 |