Cluster: HRGMv2_2987_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2987
- CGC Family ID: CGCFAM_01466
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2987_13 | HRGMv2_2987_13_7 | 5388 | 6275 | - | 3.A.1.5.20 |
| TC | HRGMv2_2987_13 | HRGMv2_2987_13_8 | 6272 | 7264 | - | 3.A.1.5.20 |
| TC | HRGMv2_2987_13 | HRGMv2_2987_13_9 | 7254 | 8156 | - | 3.A.1.5.19 |
| TC | HRGMv2_2987_13 | HRGMv2_2987_13_10 | 8149 | 9162 | - | 3.A.1.5.19 |
| TC | HRGMv2_2987_13 | HRGMv2_2987_13_11 | 9200 | 10795 | - | 3.A.1.5.28 |
| CAZyme | HRGMv2_2987_13 | HRGMv2_2987_13_12 | 11143 | 12246 | + | GH179 |
Gene ID: HRGMv2_2987_13_7
Type: TC
Location: 5388 - 6275 (-)
Type: TC
Location: 5388 - 6275 (-)
Gene ID: HRGMv2_2987_13_8
Type: TC
Location: 6272 - 7264 (-)
Type: TC
Location: 6272 - 7264 (-)
Gene ID: HRGMv2_2987_13_9
Type: TC
Location: 7254 - 8156 (-)
Type: TC
Location: 7254 - 8156 (-)
Gene ID: HRGMv2_2987_13_10
Type: TC
Location: 8149 - 9162 (-)
Type: TC
Location: 8149 - 9162 (-)
Gene ID: HRGMv2_2987_13_11
Type: TC
Location: 9200 - 10795 (-)
Type: TC
Location: 9200 - 10795 (-)
Gene ID: HRGMv2_2987_13_12
Type: CAZyme
Location: 11143 - 12246 (+)
Type: CAZyme
Location: 11143 - 12246 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2987_13_7 | vegetarian > vegan | 2.85417 | 0.00037 |
| HRGMv2_2987_13_11 | vegetarian > vegan | 1.43214 | 0.00037 |