Cluster: HRGMv2_2987_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2987
- CGC Family ID: CGCFAM_04077
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2987_45 | HRGMv2_2987_45_8 | 5695 | 6903 | - | GH179 |
| TF | HRGMv2_2987_45 | HRGMv2_2987_45_9 | 7031 | 7837 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_2987_45 | HRGMv2_2987_45_10 | 8033 | 10036 | + | GH31_4 |
| TC | HRGMv2_2987_45 | HRGMv2_2987_45_11 | 10115 | 11995 | - | 3.A.1.111.2 |
| TC | HRGMv2_2987_45 | HRGMv2_2987_45_12 | 11976 | 13859 | - | 3.A.1.21.1 |
Gene ID: HRGMv2_2987_45_8
Type: CAZyme
Location: 5695 - 6903 (-)
Type: CAZyme
Location: 5695 - 6903 (-)
Gene ID: HRGMv2_2987_45_9
Type: TF
Location: 7031 - 7837 (+)
Type: TF
Location: 7031 - 7837 (+)
Gene ID: HRGMv2_2987_45_10
Type: CAZyme
Location: 8033 - 10036 (+)
Type: CAZyme
Location: 8033 - 10036 (+)
Gene ID: HRGMv2_2987_45_11
Type: TC
Location: 10115 - 11995 (-)
Type: TC
Location: 10115 - 11995 (-)
Gene ID: HRGMv2_2987_45_12
Type: TC
Location: 11976 - 13859 (-)
Type: TC
Location: 11976 - 13859 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Hominenteromicrobium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.