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Cluster: HRGMv2_2987_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2987_3 HRGMv2_2987_3_37 36067 37878 - 3.A.1.106.3
TC HRGMv2_2987_3 HRGMv2_2987_3_38 37906 39705 - 3.A.1.135.5
TC HRGMv2_2987_3 HRGMv2_2987_3_39 40148 40843 + 1.C.113.1.10
peptidase HRGMv2_2987_3 HRGMv2_2987_3_40 40917 41858 + S33.UPW
NULL(UNKNOWN) HRGMv2_2987_3 HRGMv2_2987_3_41 41936 42388 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2987_3 HRGMv2_2987_3_42 42541 43407 + CE4
pfam HRGMv2_2987_3 HRGMv2_2987_3_43 43470 44009 + Amidase_3
TC HRGMv2_2987_3 HRGMv2_2987_3_44 44006 45319 + 2.A.25.1.3
Gene ID: HRGMv2_2987_3_37
Type: TC
Location: 36067 - 37878 (-)
Gene ID: HRGMv2_2987_3_38
Type: TC
Location: 37906 - 39705 (-)
Gene ID: HRGMv2_2987_3_39
Type: TC
Location: 40148 - 40843 (+)
Gene ID: HRGMv2_2987_3_40
Type: peptidase
Location: 40917 - 41858 (+)
Gene ID: HRGMv2_2987_3_41
Type:
Location: 41936 - 42388 (-)
Gene ID: HRGMv2_2987_3_42
Type: CAZyme
Location: 42541 - 43407 (+)
Gene ID: HRGMv2_2987_3_43
Type: pfam
Location: 43470 - 44009 (+)
Gene ID: HRGMv2_2987_3_44
Type: TC
Location: 44006 - 45319 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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