Cluster: HRGMv2_2986_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2986
- CGC Family ID: CGCFAM_05083
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2986_15 | HRGMv2_2986_15_21 | 18226 | 18969 | + | 3.A.1.132.6 |
| NULL(UNKNOWN) | HRGMv2_2986_15 | HRGMv2_2986_15_22 | 18962 | 20413 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2986_15 | HRGMv2_2986_15_23 | 20621 | 22339 | - | GH2 |
| TC | HRGMv2_2986_15 | HRGMv2_2986_15_24 | 22327 | 23607 | - | 2.A.1.84.3 |
Gene ID: HRGMv2_2986_15_21
Type: TC
Location: 18226 - 18969 (+)
Type: TC
Location: 18226 - 18969 (+)
Gene ID: HRGMv2_2986_15_22
Type:
Location: 18962 - 20413 (+)
Type:
Location: 18962 - 20413 (+)
Gene ID: HRGMv2_2986_15_23
Type: CAZyme
Location: 20621 - 22339 (-)
Type: CAZyme
Location: 20621 - 22339 (-)
Gene ID: HRGMv2_2986_15_24
Type: TC
Location: 22327 - 23607 (-)
Type: TC
Location: 22327 - 23607 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900553545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2986_15_22 | vegetarian > vegan | 1.08197 | 0.00050 |