Cluster: HRGMv2_2986_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2986
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2986_13 | HRGMv2_2986_13_52 | 52052 | 53155 | - | GT28 |
| pfam | HRGMv2_2986_13 | HRGMv2_2986_13_53 | 53295 | 53471 | + | DUF1540 |
| TC | HRGMv2_2986_13 | HRGMv2_2986_13_54 | 53557 | 54981 | - | 2.A.40.7.6 |
Gene ID: HRGMv2_2986_13_52
Type: CAZyme
Location: 52052 - 53155 (-)
Type: CAZyme
Location: 52052 - 53155 (-)
Gene ID: HRGMv2_2986_13_53
Type: pfam
Location: 53295 - 53471 (+)
Type: pfam
Location: 53295 - 53471 (+)
Gene ID: HRGMv2_2986_13_54
Type: TC
Location: 53557 - 54981 (-)
Type: TC
Location: 53557 - 54981 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp900553545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_2986_13_52 | vegetarian > omnivore | 1.75807 | 0.00110 |
| HRGMv2_2986_13_53 | vegetarian > vegan | 1.30020 | 0.00050 |